The detailed information of tRNA gene sequence


Sequence ID>SRA1015354
Genome IDSRR023846.29249
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 177
End posion on genome 261
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggttcttcgc
tRNA gene sequence 
GGTGGGGTGGCCGAGTGGTTAAAGGCAGCAGACTGTAAATCTGCCCTCTCTGAGTACGCT
GGTTCGAATCCAGCCCCCACCACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1015354	Tyr	GTA
                   c      ACCA aannnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A A        A     CCTCTCTGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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