The detailed information of tRNA gene sequence


Sequence ID>SRA1015475
Genome IDSRR023846.78135
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 14
End posion on genome 87
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccgcatcga
tRNA gene sequence 
GGCCCGATGGCGGAGTGGTGACGTAGAGGACTGCAAATCCTCGCACCCGGGTTCGATTCC
CGGTCGGGCCTCCA
Downstream region at tRNA end position 
gcggttttcc
Secondary structure (Cloverleaf model)
>SRA1015475	Cys	GCA
                   a      TCCA gcggttttcc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G G C G       C C G G G     C
      G       | | +                 T T
      G     A C G T
        T G        A     GCAC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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