The detailed information of tRNA gene sequence


Sequence ID>SRA1015537
Genome IDSRR023846.102954
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 125
End posion on genome 53
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttggggcct
tRNA gene sequence 
GGCTGCGTAGTTCAAGGGATAGAATAGGCGTTTCCTAAACGCTTGATAGCAGTTCGAATC
TGCTCGTGGCTACat
Downstream region at tRNA end position 
atataacttg
Secondary structure (Cloverleaf model)
>SRA1015537	Arg	CCT
                   t      ACat atataacttg
                     G + T
                     G - C
                     C - G
                     T + G
                     G + T
                     C - G
                     G - C          T A
                    T     T C G T C     A
      G A A        A      | | | | |     G
    G       C T T G       A G C A G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     TGAT
                    G + T
                    G - C
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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