The detailed information of tRNA gene sequence


Sequence ID>SRA1015539
Genome IDSRR023846.103355
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 202
End posion on genome 127
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taccaaacag
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCACTGGTTCGAGT
CCAGTCCCCGCTACCA
Downstream region at tRNA end position 
aaaaagccgt
Secondary structure (Cloverleaf model)
>SRA1015539	Met	CAT
                   g      ACCA aaaaagccgt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C G A G       A C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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