The detailed information of tRNA gene sequence


Sequence ID>SRA1015566
Genome IDSRR023846.114083
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 62
End posion on genome 143
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcaacatgg
tRNA gene sequence 
GGCAGCGTGTCCGAGTGGTTAAGGAGGTAGATTCGAAATCTACTGGGCTCTGCCCGCGCG
AGTTCAAATCTCGTCGCTGTCGtct
Downstream region at tRNA end position 
tttttttttt
Secondary structure (Cloverleaf model)
>SRA1015566	Ser	CGA
                   g      Gtct tttttttttt
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      + | | | |     A
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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