The detailed information of tRNA gene sequence


Sequence ID>SRA1015596
Genome IDSRR023846.127230
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 298
End posion on genome 211
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TTAGAAGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGCTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCCTTCTCTGCAA
Downstream region at tRNA end position 
aaaagcccgt
Secondary structure (Cloverleaf model)
>SRA1015596	Ser	TGA
                   n      GCAA aaaagcccgt
                     T   T
                     T   C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK