The detailed information of tRNA gene sequence


Sequence ID>SRA1015599
Genome IDSRR023846.128340
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 172
End posion on genome 246
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggatcgagat
tRNA gene sequence 
GCACACGTAGCTCAGCGGTAGAGTGCTCGGTTGTCAGCCGAACGGTCGCGGGTTCGATCC
CCGTCGTGTGCGCCA
Downstream region at tRNA end position 
aagccccatc
Secondary structure (Cloverleaf model)
>SRA1015599	Asp	GTC
                   t      GCCA aagccccatc
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      C     C T C G       G C G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        G     CGGTC
                    C   A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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