The detailed information of tRNA gene sequence


Sequence ID>SRA1015602
Genome IDSRR023846.129340
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 112
End posion on genome 23
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggccggttcc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACCGGAAACGGTA
TCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gctaattcgg
Secondary structure (Cloverleaf model)
>SRA1015602	Ser	GGA
                   c      GCCA gctaattcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACCGGAAACGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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