The detailed information of tRNA gene sequence


Sequence ID>SRA1015609
Genome IDSRR023846.131316
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 96
End posion on genome 6
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agccccattc
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATGGCTCAAAAGGTC
ATCGTGGGTTCGAATCCCATCCTCTCTGCTA
Downstream region at tRNA end position 
attatnnnnn
Secondary structure (Cloverleaf model)
>SRA1015609	Ser	GGA
                   c      GCTA attatnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATGGCTCAAAAGGTCATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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