The detailed information of tRNA gene sequence


Sequence ID>SRA1015621
Genome IDSRR023846.135281
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 129
End posion on genome 53
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccccatcgga
tRNA gene sequence 
CGGGGAGTGGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttttttcagc
Secondary structure (Cloverleaf model)
>SRA1015621	Pro	TGG
                   a      ACCA ttttttcagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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