The detailed information of tRNA gene sequence


Sequence ID>SRA1015648
Genome IDSRR023846.144669
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 17
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caggaaccgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
actcccaaaa
Secondary structure (Cloverleaf model)
>SRA1015648	Met	CAT
                   t      ACCA actcccaaaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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