The detailed information of tRNA gene sequence


Sequence ID>SRA1015686
Genome IDSRR023846.158462
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 139
End posion on genome 225
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tggccccttt
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTAAAGGCAGCAGACTGTAAATCTGCCCGGGTTTCCCGTACG
CTGGTTCGAATCCAGCCCTGTCCACCA
Downstream region at tRNA end position 
aagctttgcg
Secondary structure (Cloverleaf model)
>SRA1015686	Tyr	GTA
                   t      ACCA aagctttgcg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A A        A     CCGGGTTTCCCGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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