The detailed information of tRNA gene sequence


Sequence ID>SRA1015718
Genome IDSRR023846.170493
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 289
End posion on genome 215
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnnnnnaaa
tRNA gene sequence 
GCCGTTATAGCTCAGTGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCCGGGGTTCAAATC
CCCGTAACGGCTCGA
Downstream region at tRNA end position 
gacttcttct
Secondary structure (Cloverleaf model)
>SRA1015718	Thr	GGT
                   a      TCGA gacttcttct
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     A - T          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      T     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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