The detailed information of tRNA gene sequence


Sequence ID>SRA1015727
Genome IDSRR023846.173391
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 266
End posion on genome 185
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gagaagcaaa
tRNA gene sequence 
GGCACTGTGTCCGAGTGGTTAAGGAGTTGGTTTTGAAAGCCAATGGGCTCTGCCCGCGCG
AGTTCAAATCTCGTCGGTGTCGatt
Downstream region at tRNA end position 
tttgatttgt
Secondary structure (Cloverleaf model)
>SRA1015727	Ser	TGA
                   a      Gatt tttgatttgt
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      + | | | |     A
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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