The detailed information of tRNA gene sequence


Sequence ID>SRA1015741
Genome IDSRR023846.178124
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 266
End posion on genome 179
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatttttct
tRNA gene sequence 
AGAGAAGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGCTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCCTTCTCTGCAA
Downstream region at tRNA end position 
gctagattaa
Secondary structure (Cloverleaf model)
>SRA1015741	Ser	TGA
                   t      GCAA gctagattaa
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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