The detailed information of tRNA gene sequence


Sequence ID>SRA1015750
Genome IDSRR023846.180630
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 134
End posion on genome 209
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcgacaccaT
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1015750	Pro	CGG
                   T      AAnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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