The detailed information of tRNA gene sequence


Sequence ID>SRA1015774
Genome IDSRR023846.193740
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 127
End posion on genome 200
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagttcatt
tRNA gene sequence 
AGGGGCGTTTTCTAATGGCAAGAATCTGGTCTCCAAAACCAGCTATGGGGGTTCGAGTCC
CTCCGCCCCTGCCA
Downstream region at tRNA end position 
aacacatcga
Secondary structure (Cloverleaf model)
>SRA1015774	Trp	CCA
                   t      GCCA aacacatcga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
        A A        T      | + | | |     G
      T     T C T T       G G G G G     C
      G     | | | |                 T T
      G     A G A A
        C A        T     CTAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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