The detailed information of tRNA gene sequence


Sequence ID>SRA1015818
Genome IDSRR023846.211275
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 53
End posion on genome 129
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtgatggtac
tRNA gene sequence 
GCGGGTGTAGCTCAGCTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttcatctgag
Secondary structure (Cloverleaf model)
>SRA1015818	Asp	GTC
                   c      GCCA ttcatctgag
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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