The detailed information of tRNA gene sequence


Sequence ID>SRA1015821
Genome IDSRR023846.211984
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 188
End posion on genome 270
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
caacgcacgc
tRNA gene sequence 
GGCGGGTTGCCCGAGTGGCCAATGGGAGCGGACTGTAAATCCGCCGGCTTAGCCTTCGAA
GGTTCGAATCCTTCACCCGCCACgn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1015821	Tyr	GTA
                   c      ACgn nnnnnnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A A G G     C
    G       + | | |                 T T
    C       T G G G
      C A A        A     CGGCTTAGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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