The detailed information of tRNA gene sequence


Sequence ID>SRA1015831
Genome IDSRR023846.217064
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 240
End posion on genome 166
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgcgtcgccc
tRNA gene sequence 
CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGCCGCAGGTTCAAA
TCCTGTCGCCCCGACgt
Downstream region at tRNA end position 
cacggcccca
Secondary structure (Cloverleaf model)
>SRA1015831	Pro	TGG
                   c      ACgt cacggcccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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