The detailed information of tRNA gene sequence


Sequence ID>SRA1015839
Genome IDSRR023846.222496
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 173
End posion on genome 82
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacggcctgc
tRNA gene sequence 
GGAGACGTGGCCGAGCGGCTGAAGGCACTCGTTTGCTAAATGAGCATACCCCGAAAGGGG
TATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tttacgacaa
Secondary structure (Cloverleaf model)
>SRA1015839	Ser	GCT
                   c      GCCA tttacgacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACCCCGAAAGGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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