The detailed information of tRNA gene sequence


Sequence ID>SRA1015867
Genome IDSRR023846.234034
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 144
End posion on genome 234
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgccccttgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCGATTCGAAATCGAGTAGACTGCAAAACAGT
CTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctttctttcc
Secondary structure (Cloverleaf model)
>SRA1015867	Ser	CGA
                   c      GCCA ctttctttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAGACTGCAAAACAGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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