The detailed information of tRNA gene sequence


Sequence ID>SRA1015908
Genome IDSRR023846.253135
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 153
End posion on genome 78
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccatgatca
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCAGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGTCCGTCTCCACCA
Downstream region at tRNA end position 
tgtttttgtt
Secondary structure (Cloverleaf model)
>SRA1015908	Ala	TGC
                   a      ACCA tgtttttgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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