The detailed information of tRNA gene sequence


Sequence ID>SRA1015938
Genome IDSRR023846.274176
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 17
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaggagcaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCATAGGTTCAAA
TCCTATCCCCGCTACCA
Downstream region at tRNA end position 
ccgagaggcc
Secondary structure (Cloverleaf model)
>SRA1015938	Met	CAT
                   a      ACCA ccgagaggcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    T       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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