The detailed information of tRNA gene sequence


Sequence ID>SRA1015951
Genome IDSRR023846.279595
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 223
End posion on genome 149
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctcgactaca
tRNA gene sequence 
CGGCCCTTCGTCTAGCGGTTAGGACGACGCCCTCTCACGGCGTAAGCACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
gtcttttcaa
Secondary structure (Cloverleaf model)
>SRA1015951	Glu	CTC
                   a      ACCA gtcttttcaa
                     C   C
                     G + T
                     G   G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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