The detailed information of tRNA gene sequence


Sequence ID>SRA1015978
Genome IDSRR023846.292220
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 97
End posion on genome 184
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtccggcgc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCTTGGAAAGCGGGTTGGGTTAACGCCCTC
AGGGGTTCGAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
ctcttgcccc
Secondary structure (Cloverleaf model)
>SRA1015978	Ser	GGA
                   c      GCCA ctcttgcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAACGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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