The detailed information of tRNA gene sequence


Sequence ID>SRA1015979
Genome IDSRR023846.292388
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 87
End posion on genome 162
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccccagaagt
tRNA gene sequence 
GCCCTTGTAGCTCAGTTGGTAGAGCACCTGATTTGTAATCAGGGGGTCACGAGTTCGAAC
CTTGTCGGGGGCACCA
Downstream region at tRNA end position 
cttctatccc
Secondary structure (Cloverleaf model)
>SRA1015979	Thr	TGT
                   t      ACCA cttctatccc
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          C A
                    T     T G T T C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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