The detailed information of tRNA gene sequence


Sequence ID>SRA1015992
Genome IDSRR023846.296329
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 85
End posion on genome 162
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtcgaacat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCATCGGTTCGATC
CCGATAGGGCTCCGACCA
Downstream region at tRNA end position 
tcgttttgag
Secondary structure (Cloverleaf model)
>SRA1015992	Ala	TGC
                   t      ACCA tcgttttgag
                     G   G
                     G - C
                     G - C
                     G + T
                     C   C
                     C - G
                     T + G          C C
                    T     G A T A G     C
      C G A        A      |   + | +     T
    T       C T C G       C G G T T     A
    G       | | | |                 C G
    G       G A G C
      G A          G     AGGTCAT
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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