The detailed information of tRNA gene sequence


Sequence ID>SRA1015993
Genome IDSRR023846.298210
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 230
End posion on genome 158
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnncacgcac
tRNA gene sequence 
GCCCCTATAGCTCAGTGGTAGAGCACTCGCTTCGTAAGCGAAAGGTCGGTGGTTCGATCC
CGCCTGGGGGCTCgt
Downstream region at tRNA end position 
cttttgctta
Secondary structure (Cloverleaf model)
>SRA1015993	Thr	CGT
                   c      TCgt cttttgctta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     C C G C C     A
        G A        A      | | + | |     G
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C   A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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