The detailed information of tRNA gene sequence


Sequence ID>SRA1016016
Genome IDSRR023846.313241
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 198
End posion on genome 270
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttattattaa
tRNA gene sequence 
GGGACTTTAGTATAATGGTTAATATTTATGACTTTTAATCATTAAGATATTGGTTCGAAT
CCAATAGGTCCTAata
Downstream region at tRNA end position 
aagcgattat
Secondary structure (Cloverleaf model)
>SRA1016016	Lys	TTT
                   a      Aata aagcgattat
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     T A A C C     A
      T A A        A      | | | | |     G
    G       T A T G       A T T G G     C
    G       | | | +                 T T
    T       A T A T
      T A          T     AAGAT
                    T   T
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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