The detailed information of tRNA gene sequence


Sequence ID>SRA1016033
Genome IDSRR023846.317854
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 145
End posion on genome 221
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
atacacacat
tRNA gene sequence 
GCGCAATTAGCTCAGTTGGTCAGAGTAGGAGCCTCTAAAACTCACGGTCATCGGTTCGAT
CCCGATATTGCGCACCA
Downstream region at tRNA end position 
aaataactaa
Secondary structure (Cloverleaf model)
>SRA1016033	Sup	CTA
                   t      ACCA aaataactaa
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          C T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | +                 T T
    G       G A G T
      T C A        A     CGGTC
                    G   A
                    G - C
                    A - T
                    G - C
                    C   A
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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