The detailed information of tRNA gene sequence


Sequence ID>SRA1016128
Genome IDSRR023846.358402
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 307
End posion on genome 222
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aatcgcctga
tRNA gene sequence 
GCCAGAGTGGTGTAATGGTAGCCACGAGGGACTTAAAATCCCTTGTCTTCACGGACGTAC
GGGTTCGAGTCCCGTCTCTGGTACTA
Downstream region at tRNA end position 
aaaaccccgt
Secondary structure (Cloverleaf model)
>SRA1016128	Leu	TAA
                   a      ACTA aaaaccccgt
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     G
    G       T G T G       A C G G G     C
    G         | | |                 T T
    T       C C A C
      A G          G     TGTCTTCACGGACGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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