The detailed information of tRNA gene sequence


Sequence ID>SRA1016187
Genome IDSRR023846.389028
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 149
End posion on genome 238
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgcgccgtt
tRNA gene sequence 
GGAGAGATGCCGGAGTGGCCGAACGGGACGGATTCGAAATCCGTTGTACTGGCGACAGTA
CCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
tacaaatgaa
Secondary structure (Cloverleaf model)
>SRA1016187	Ser	CGA
                   t      GCCA tacaaatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G G C C       T A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACTGGCGACAGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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