The detailed information of tRNA gene sequence


Sequence ID>SRA1016204
Genome IDSRR023846.401391
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 9
End posion on genome 91
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ntagcacaaT
tRNA gene sequence 
GACAGCTTCGCCGAGTGGTTAAGGCGTTAGCCTGCTAAGTTAATGGGGCAACCCGCGTGA
GTTCGAATCTCACAGCTGTCGTtt
Downstream region at tRNA end position 
ttcttatctc
Secondary structure (Cloverleaf model)
>SRA1016204	Ser	GCT
                   T      GTtt ttcttatctc
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C A C T C     A
      T G A        C      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGCAACCCGC
                    T - A
                    T - A
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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