The detailed information of tRNA gene sequence


Sequence ID>SRA1016209
Genome IDSRR023846.404417
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaccaccgg
tRNA gene sequence 
AGGGCACTAGCTCAACTGGCAGAGCATCGGTCTCCAAAACCGAAGGTTGGGGGTTCAAGT
CCCTCGTGCCCTGCag
Downstream region at tRNA end position 
gacggcagca
Secondary structure (Cloverleaf model)
>SRA1016209	Trp	CCA
                   g      GCag gacggcagca
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G          T G
                    T     C T C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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