The detailed information of tRNA gene sequence


Sequence ID>SRA1016212
Genome IDSRR023846.405038
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 111
End posion on genome 27
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gcctcgctta
tRNA gene sequence 
GGAGAGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGTCTACGACTTCGAA
GGTTCGAATCCTTCCCCCTCCACCA
Downstream region at tRNA end position 
gatttagcgc
Secondary structure (Cloverleaf model)
>SRA1016212	Tyr	GTA
                   a      ACCA gatttagcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A   C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCTACGACTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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