The detailed information of tRNA gene sequence


Sequence ID>SRA1016246
Genome IDSRR023846.416980
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 8
End posion on genome 81
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnttattta
tRNA gene sequence 
AGGGGATTAGTTGAGTGGTTTAACACCGGTCTTACACACTGGATACAGAGGTTCGATTCC
TCTATTCCTTACAA
Downstream region at tRNA end position 
aattaaaata
Secondary structure (Cloverleaf model)
>SRA1016246	Val	TAC
                   a      ACAA aattaaaata
                     A - T
                     G + T
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A          T T
                    T     T C T C C     A
        G A        A      | | | | |     G
      T     G T T G       A G A G G     C
      G     + | | |                 T T
      G     T A A C
        T T        A     ATAC
                    C - G
                    C - G
                    G + T
                    G - C
                    T - A
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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