The detailed information of tRNA gene sequence


Sequence ID>SRA1016305
Genome IDSRR023846.442705
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 227
End posion on genome 154
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcccaccgg
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTAGAGCAAACGGCTCATAATCGTTGTGTCGCGGGTTCAAGT
CCCGCCCTCGCTACgc
Downstream region at tRNA end position 
ggtccgactg
Secondary structure (Cloverleaf model)
>SRA1016305	Met	CAT
                   g      ACgc ggtccgactg
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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