The detailed information of tRNA gene sequence


Sequence ID>C152000003
Genome IDAP014577
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia sp. RPE67 [AP014576, AP014577, AP014578]
Start position on genome 306360
End posion on genome 306455
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcatgacgaa
tRNA gene sequence 
GGAAGGCATCCGTATCCGGTGGTGCGGCCGGGCTTCAAACCCGGTAGGGGGTGTCAGACA
CTCTCTGGTCAGTTCGACTCTGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tggtgtgcaa
Secondary structure (Cloverleaf model)
>C152000003	SeC	TCA
                   a      GCCA tggtgtgcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G T C     A
      C C T        C      | + | | |     G
    G       A T G C       G T C A G     C
    G       | + | |                 T T
    T       T G C G
      G G          G     TAGGGGGTGTCAGACACTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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