The detailed information of tRNA gene sequence


Sequence ID>SRA1016318
Genome IDSRR023846.446939
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 99
End posion on genome 172
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gccccgttgg
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGTTACGCAGAGGACTGCAAATCCTTGCACGGGGGTTCGATTCC
CTCCGAGGCCTCCA
Downstream region at tRNA end position 
ttgcccagtt
Secondary structure (Cloverleaf model)
>SRA1016318	Cys	GCA
                   g      TCCA ttgcccagtt
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     G G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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