The detailed information of tRNA gene sequence


Sequence ID>SRA1016321
Genome IDSRR023846.447668
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 181
End posion on genome 110
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaaaaaatta
tRNA gene sequence 
GGATCTATAGTGTAGCGGTTATCATCCAGGTTTTCCATACCTGGGACGGGGGTTCGACTC
TCCCTGGATTCAttc
Downstream region at tRNA end position 
ttttgttact
Secondary structure (Cloverleaf model)
>SRA1016321	Gly	TCC
                   a      Attc ttttgttact
                     G - C
                     G + T
                     A - T
                     T - A
                     C - G
                     T + G
                     A - T          T C
                    T     C C C T C     A
      C G A        A      | | | + |     G
    G       T G T G       G G G G G     C
    G         | | +                 T T
    T       T C A T
      T A          C     GGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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