The detailed information of tRNA gene sequence


Sequence ID>SRA1016327
Genome IDSRR023846.452807
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 60
End posion on genome 141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcaacatgg
tRNA gene sequence 
GGCAGCGTGTCCGAGTGGTTAAGGAGGTAGATTCGAAATCTACTGGGCTCTGCCCGCGCG
AGTTCAAATCTCGTCGCTGTCGtct
Downstream region at tRNA end position 
tttttttttt
Secondary structure (Cloverleaf model)
>SRA1016327	Ser	CGA
                   g      Gtct tttttttttt
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      + | | | |     A
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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