The detailed information of tRNA gene sequence


Sequence ID>SRA1016337
Genome IDSRR023846.457634
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 222
End posion on genome 148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccggcgaca
tRNA gene sequence 
CGGGCGGTAGCTCAGCCGGTTAGAGCAGTCGACTCATAATCGATCGGTCACGGGTTCAAG
TCCCGTCCGCCCTACtt
Downstream region at tRNA end position 
ccgagctgat
Secondary structure (Cloverleaf model)
>SRA1016337	Met	CAT
                   a      ACtt ccgagctgat
                     C   T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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