The detailed information of tRNA gene sequence


Sequence ID>SRA1016359
Genome IDSRR023846.464443
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 179
End posion on genome 253
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggctgaaccc
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCCTGGTTCGAG
TCCAGGCAGGCCCACtg
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016359	Ile	GAT
                   c      ACtg gnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G G A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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