The detailed information of tRNA gene sequence


Sequence ID>SRA1016367
Genome IDSRR023846.468253
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 69
End posion on genome 144
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaagagcgc
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGTCGGTTCGAGT
CCGGCCGGGCCTACCA
Downstream region at tRNA end position 
cccttctatt
Secondary structure (Cloverleaf model)
>SRA1016367	Met	CAT
                   c      ACCA cccttctatt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G G C C     A
      T A A        A      | + | | |     G
    G       C T C G       G T C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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