The detailed information of tRNA gene sequence


Sequence ID>SRA1016408
Genome IDSRR023846.483665
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 125
End posion on genome 199
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
catggacgcg
tRNA gene sequence 
AAGCGCGTAGCTCAGCTGGTAGAGCAACGGACTTTTAATCTGTAGGTCTTGGGTTCGAAC
CCCAACGCGCTCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016408	Lys	TTT
                   g      ACCn nnnnnnnnnn
                     A   C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C A
                    T     A A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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