The detailed information of tRNA gene sequence


Sequence ID>SRA1016434
Genome IDSRR023846.494929
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 158
End posion on genome 74
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agcccggcgt
tRNA gene sequence 
GCCCCTGTGGTGAAATTGGTAGACGCGTCCGACTCAAAATCGGATTCCGCAAGGAGTGCT
GGTTCGAGCCCGGCCAGGGGCACCA
Downstream region at tRNA end position 
atttcccgga
Secondary structure (Cloverleaf model)
>SRA1016434	Leu	CAA
                   t      ACCA atttcccgga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     C G G C C     A
      T A A        G      | | + | |     G
    T       A G T G       G C T G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGCAAGGAGT
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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