The detailed information of tRNA gene sequence


Sequence ID>SRA1016451
Genome IDSRR023846.503935
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 86
End posion on genome 160
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaccaacttg
tRNA gene sequence 
GTAGATATAGCTCAGCTGGTTAGAGCGTCGGATTGTGATTCCGAAGGTCGTGGGTTCGAG
CCCCATTATTTACCCtt
Downstream region at tRNA end position 
ttgaaaagtc
Secondary structure (Cloverleaf model)
>SRA1016451	His	GTG
                   g      CCtt ttgaaaagtc
                     G - C
                     T - A
                     A - T
                     G + T
                     A - T
                     T - A
                     A - T          C G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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