The detailed information of tRNA gene sequence


Sequence ID>SRA1016469
Genome IDSRR023846.513758
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 129
End posion on genome 53
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatgcggcgg
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tcttttcacg
Secondary structure (Cloverleaf model)
>SRA1016469	Met	CAT
                   g      ACCA tcttttcacg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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