The detailed information of tRNA gene sequence


Sequence ID>SRA1016500
Genome IDSRR023846.533581
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 23
End posion on genome 98
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cgcgcagcat
tRNA gene sequence 
GCACCTCTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGGGTTCTCGGTTCAAGT
CCGAGGGGGTGCACCA
Downstream region at tRNA end position 
caaaatgggt
Secondary structure (Cloverleaf model)
>SRA1016500	Lys	CTT
                   t      ACCA caaaatgggt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G A G C C     A
      T A A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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